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0001110803FALSE00011108032025-02-062025-02-06

UNITED STATES
SECURITIES AND EXCHANGE COMMISSION
Washington, D.C. 20549
Form 8-K
Current Report

Pursuant to Section 13 or 15(d) of the Securities Exchange Act of 1934
Date of Report (Date of earliest event reported): February 6, 2025
ilmnlogoa19.jpg
Illumina, Inc.
(Exact name of registrant as specified in its charter)

001-35406
(Commission File Number)
Delaware   33-0804655
(State or other jurisdiction of incorporation)   (I.R.S. Employer Identification No.)

5200 Illumina Way, San Diego, CA 92122
(Address of principal executive offices) (Zip code)

(858) 202-4500
(Registrant’s telephone number, including area code)

N/A
(Former name or former address, if changed since last report)

Check the appropriate box below if the Form 8-K filing is intended to simultaneously satisfy the filing obligation of the registrant under any of the following provisions:
☐     Written communications pursuant to Rule 425 under the Securities Act (17 CFR 230.425)
☐     Soliciting material pursuant to Rule 14a-12 under the Exchange Act (17 CFR 240.14a-12)
☐     Pre-commencement communications pursuant to Rule 14d-2(b) under the Exchange Act (17 CFR 240.14d-2(b))
☐     Pre-commencement communications pursuant to Rule 13e-4(c) under the Exchange Act (17 CFR 240.13e-4(c))
Securities registered pursuant to Section 12(b) of the Act:
Title of each class Trading Symbol(s) Name of each exchange on which registered
Common Stock, $0.01 par value ILMN The Nasdaq Stock Market LLC
Indicate by check mark whether the registrant is an emerging growth company as defined in Rule 405 of the Securities Act of 1933 (§230.405 of this chapter) or Rule 12b-2 of the Securities Exchange Act of 1934 (§240.12b-2 of this chapter).
Emerging growth company ☐    
If an emerging growth company, indicate by check mark if the registrant has elected not to use the extended transition period for complying with any new or revised financial accounting standards provided pursuant to Section 13a of the Exchange Act. o    



TABLE OF CONTENTS

Item 2.02 Results of Operations and Financial Condition
Item 9.01 Financial Statements and Exhibits
SIGNATURES
Exhibit Index




Table of Contents

Item 2.02 Results of Operations and Financial Condition.

On February 6, 2025, Illumina, Inc. (the "Company") issued a press release announcing financial results for the fourth quarter and fiscal year ended December 29, 2024. The full text of the Company’s press release is attached hereto as Exhibit 99.1.

The information furnished pursuant to this Item 2.02 (including Exhibit 99.1) shall not be deemed to be “filed” for purposes of Section 18 of the Securities Exchange Act of 1934 (the “Exchange Act”) or otherwise subject to the liabilities under that Section and shall not be deemed to be incorporated by reference into any filing of the Company under the Securities Act of 1933 or the Exchange Act.




Table of Contents

Item 9.01 Financial Statements and Exhibits.

(d) Exhibits.

99.1    Press release dated February 6, 2025, announcing Illumina, Inc.’s financial results for the fourth quarter and fiscal year ended December 29, 2024

104    Cover Page Interactive Data File (embedded within the Inline XBRL document)    




Table of Contents

SIGNATURES

Pursuant to the requirements of the Securities Exchange Act of 1934, as amended, the Registrant has duly caused this report to be signed on its behalf by the undersigned hereunto duly authorized.
       
 
ILLUMINA, INC.
 
Date: February 6, 2025 By:  
/s/ ANKUR DHINGRA
  Name: Ankur Dhingra
  Title: Chief Financial Officer




Table of Contents

Exhibit Index
Exhibit Number Description
Press release dated February 6, 2025 announcing Illumina, Inc.’s financial results for the fourth quarter and fiscal year ended December 29, 2024
104 Cover Page Interactive Data File (embedded within the Inline XBRL document)


EX-99.1 2 a4q24earningsrelease.htm EX-99.1 Document

Investors:
Salli Schwartz
+1.858.291.6421
ir@illumina.com
image1.jpg
Media:
Bonny Fowler
+1.740.641.5579
pr@illumina.com

Illumina Reports Financial Results for Fourth Quarter and Fiscal Year 2024

•Core Illumina revenue of $1.1 billion for Q4 2024, up 1% from Q4 2023 on both a reported and constant currency basis; revenue of $4.3 billion for fiscal year 2024, down 2% from fiscal year 2023 on both a reported and constant currency basis
•Core Illumina GAAP operating margin of 15.8% and non-GAAP operating margin of 19.7% for Q4 2024; GAAP operating margin of 34.0% and non-GAAP operating margin of 21.3% for fiscal year 2024
•Core Illumina GAAP diluted earnings per share (EPS) of $0.73 and non-GAAP diluted EPS of $0.95 for Q4 2024; GAAP diluted EPS of $5.61 and non-GAAP diluted EPS of $4.16 for fiscal year 2024
•Core Illumina cash provided by operations of $1.2 billion and free cash flow of $1.1 billion for fiscal year 2024
•Fiscal year 2025 guidance does not attempt to reflect any impact from the recent China Ministry of Commerce announcement and assumes a continuation of the current macroeconomic and political environments
•For fiscal year 2025, continue to expect Core Illumina constant currency revenue growth in the low single digits (reported revenue in the range of approximately $4.28 billion to $4.4 billion) and non-GAAP operating margin of approximately 23%; expect non-GAAP diluted EPS in the range of $4.50 to $4.65

San Diego, February 6, 2025 /PRNewswire/ -- Illumina, Inc. (Nasdaq: ILMN) (“Illumina” or the “company”) today announced its financial results for the fourth quarter and fiscal year 2024. The financial results for fiscal year 2024 and Q4 2023 and fiscal year 2023 include the financial results for GRAIL which was spun off on June 24, 2024.

“The Illumina team delivered fourth quarter revenue that exceeded our expectations, and we made significant progress in 2024 toward our goals to drive customer-centric innovation, margin expansion, and EPS growth,” said Jacob Thaysen, Chief Executive Officer. “For 2025, we will continue our transformation, executing our refreshed strategy that prioritizes a sharp focus on customers and our own operational excellence in order to drive Illumina forward.”

Fourth quarter Core Illumina segment results

GAAP Non-GAAP (a)
Dollars in millions, except per share amounts
Q4 2024 Q4 2023 Q4 2024 Q4 2023
Revenue (b) $ 1,104  $ 1,097  $ 1,104  $ 1,097 
Gross margin (c) 65.9  % 63.3  % 67.4  % 64.7  %
Research and development (R&D) expense $ 256  $ 260  $ 255  $ 248 
Selling, general and administrative (SG&A) expense $ 279  $ 391  $ 271  $ 259 
Goodwill and intangible impairment $ —  $ $ —  $ — 
Legal contingency and settlement $ 18  $ $ —  $ — 
Operating profit
$ 175  $ 33  $ 218  $ 203 
Operating margin 15.8  % 3.0  % 19.7  % 18.5  %
Tax provision $ 70  * $ 47  *
Tax rate 37.9  % * 23.7  % *
Net income $ 117  * $ 152  *
Diluted EPS $ 0.73  * $ 0.95  *
* Prior year information not provided.
1


(a)See tables in “Results of Operations - Non-GAAP” section below for GAAP and non-GAAP reconciliations.
(b)Core Illumina revenue for Q4 2023 included intercompany revenue of $5 million which, prior to the spin-off of GRAIL in Q2 2024, was eliminated in consolidation.
(c)The increase in gross margin was driven by execution of our operational excellence priorities that delivered cost savings, as well as a more favorable revenue mix toward sequencing consumables.
Fourth quarter consolidated results
GAAP Non-GAAP (a)
Dollars in millions, except per share amounts
Q4 2024 Q4 2023 Q4 2024 Q4 2023
Revenue $ 1,104  $ 1,122  $ 1,104  $ 1,122 
Gross margin 65.9  % 60.1  % 67.4  % 64.4  %
R&D expense $ 256  $ 341  $ 255  $ 329 
SG&A expense $ 279  $ 485  $ 271  $ 342 
Goodwill and intangible impairment $ —  $ $ —  $ — 
Legal contingency and settlement $ 18  $ $ —  $ — 
Operating profit (loss) $ 175  $ (164) $ 218  $ 51 
Operating margin 15.8  % (14.6) % 19.7  % 4.6  %
Tax provision
$ $ $ 62  $ 26 
Tax rate (b)
0.6  % (4.9) % 31.1  % 55.4  %
Net income (loss) $ 187  $ (176) $ 138  $ 22 
Diluted earnings (loss) per share $ 1.17  $ (1.11) $ 0.86  $ 0.14 
(a)See tables in “Results of Operations - Non-GAAP” section below for GAAP and non-GAAP reconciliations.
(b)In accordance with U.S. GAAP, the tax rate is determined on a full-year forecast basis. This resulted in GRAIL-related activity impacting the consolidated tax rate in Q3 2024 and Q4 2024 even though GRAIL was divested in Q2 2024.
Capital expenditures for free cash flow purposes were $42 million for Q4 2024. Cash flow provided by operations was $364 million, compared to $224 million in the prior year period. Free cash flow (cash flow provided by operations less capital expenditures) was $322 million for the quarter, compared to $173 million in the prior year period. Depreciation and amortization expenses were $71 million for Q4 2024. At the close of the quarter, the company held $1.22 billion in cash, cash equivalents and short-term investments.

Fiscal year 2024 Core Illumina segment results
GAAP Non-GAAP (a)
Dollars in millions, except per share amounts
2024 2023 2024 2023
Revenue (b) $ 4,332  $ 4,438  4,332  $ 4,438 
Gross margin
67.1  % 64.4  % 68.6  % 65.8  %
R&D expense $ 988  $ 1,030  $ 982  $ 1,001 
SG&A expense $ 900  $ 1,248  $ 1,069  $ 1,032 
Goodwill and intangible impairment $ $ $ —  $ — 
Legal contingency and settlement $ (456) $ 20  $ —  $ — 
Operating profit
$ 1,473  $ 552  $ 922  $ 885 
Operating margin 34.0  % 12.4  % 21.3  % 19.9  %
Tax provision $ 229  $ 224  $ 204  $ 228 
Tax rate 20.4  % 45.4  % 23.6  % 26.5  %
Net income $ 894  $ 269  $ 663  $ 634 
Diluted EPS $ 5.61  $ 1.70  $ 4.16  $ 4.00 
2


(a)See tables in “Results of Operations - Non-GAAP” section below for GAAP and non-GAAP reconciliations.
(b)Core Illumina revenue for 2024 and 2023 included intercompany revenue of $15 million and $26 million, respectively, which, prior to the spin-off of GRAIL in Q2 2024, was eliminated in consolidation.

Capital expenditures for free cash flow purposes were $137 million for fiscal year 2024. Cash flow provided by operations was $1.21 billion. Free cash flow was $1.07 billion for the year.

Fiscal year 2024 consolidated results
GAAP Non-GAAP (a)
Dollars in millions, except per share amounts 2024 2023 2024 2023
Revenue $ 4,372  $ 4,504  $ 4,372  $ 4,504 
Gross margin 65.4  % 60.9  % 68.4  % 65.3  %
R&D expense $ 1,169  $ 1,354  $ 1,163  $ 1,325 
SG&A expense $ 1,092  $ 1,612  $ 1,247  $ 1,367 
Goodwill and intangible impairment (b)
$ 1,889  $ 827  $ —  $ — 
Legal contingency and settlement $ (456) $ 20  $ —  $ — 
Operating (loss) profit $ (833) $ (1,069) $ 580  $ 247 
Operating margin (19.1) % (23.7) % 13.3  % 5.5  %
Tax provision $ 44  $ 44  $ 139  $ 98 
Tax rate (c)
(3.8) % (3.9) % 26.3  % 41.8  %
Net (loss) income $ (1,223) $ (1,161) $ 390  $ 137 
Diluted (loss) earnings per share $ (7.69) $ (7.34) $ 2.45  $ 0.86 
(a)See tables in “Results of Operations - Non-GAAP” section below for GAAP and non-GAAP reconciliations.
(b)The company recognized $1,466 million in goodwill and $420 million in IPR&D impairment related to GRAIL in 2024, and in 2023, recognized $712 million in goodwill and $109 million in IPR&D impairment related to GRAIL.
(c)In accordance with U.S. GAAP, the tax rate is determined on a full-year forecast basis. This resulted in GRAIL-related activity impacting the consolidated tax rate in Q3 2024 and Q4 2024 even though GRAIL was divested in Q2 2024.

Capital expenditures for free cash flow purposes were $142 million for fiscal year 2024. Cash flow provided by operations was $837 million, compared to $478 million in the prior year. Free cash flow was $695 million, compared to $283 million in the prior year. Depreciation and amortization expenses were $354 million for fiscal year 2024.

Key announcements since our last earnings release
•Announced collaboration with NVIDIA to enhance the analysis and interpretation of multiomic data
•Launched pilot proteomics program with UK Biobank and biopharma collaborators to analyze 50,000 samples
•Announced collaboration with Regeneron and investment in Truveta Genome Project to extend DNA sequence-linked healthcare database to advance scientific innovation and healthcare delivery
•Advanced NovaSeq X Series, delivering single-flow-cell system, software upgrade, and new kits to enable multiomic applications
•Announced expansion of TruSight Oncology, the latest solution to enable comprehensive genomic profiling of tumors
•Presented real-world data with Providence and Microsoft Research finding that cancer patients with early genomic testing received better precision treatment

A full list of recent announcements can be found in the company’s News Center.

Financial outlook and guidance
Fiscal year 2025 guidance does not attempt to reflect any impact from the recent China Ministry of Commerce announcement and assumes a continuation of the current macroeconomic and political environments. For fiscal year 2025, the company continues to expect Core Illumina constant currency revenue growth in the low single digits (reported revenue in the range of approximately $4.28 billion to $4.4 billion) and non-GAAP operating margin of approximately 23%. The company expects non-GAAP diluted EPS in the range of $4.50 to $4.65.
3



The company provides forward-looking guidance on a non-GAAP basis. The company is unable to provide a reconciliation of forward-looking non-GAAP financial measures to the most directly comparable GAAP reported financial measures because it is unable to predict with reasonable certainty the impact of items such as acquisition-related expenses, gains and losses from strategic investments, fair value adjustments to contingent consideration, potential future asset impairments, restructuring activities, and the ultimate outcome of pending litigation without unreasonable effort. These items are uncertain, inherently difficult to predict, depend on various factors, and could have a material impact on GAAP reported results for the guidance period. For the same reasons, the company is unable to address the significance of the unavailable information, which could be material to future results.

Conference call information
The conference call will begin at 1:30 pm Pacific Time (4:30 pm Eastern Time) on Thursday, February 6, 2025. Interested parties may access the live webcast via the Investor Info section of Illumina’s website or directly through the following link - https://illumina-earnings-call-q4-2024.open-exchange.net/. To ensure timely connection, please join at least ten minutes before the scheduled start of the call. A replay of the conference call will be posted on Illumina’s website after the event and will be available for at least 30 days following.

Statement regarding use of non-GAAP financial measures
The company reports non-GAAP results for diluted earnings per share, net income, gross margin, operating expenses, including research and development expense, selling general and administrative expense, legal contingencies and settlement, and goodwill and intangible impairment, operating income, operating margin, gross profit, other income (expense), tax provision, constant currency revenue growth, and free cash flow (on a consolidated and, as applicable, segment basis) in addition to, and not as a substitute for, or superior to, financial measures calculated in accordance with GAAP. The company’s financial measures under GAAP include substantial charges such as amortization of acquired intangible assets among others that are listed in the reconciliations of GAAP and non-GAAP financial measures included in this press release, as well as the effects of currency translation. Management has excluded the effects of these items in non-GAAP measures to assist investors in analyzing and assessing past and future operating performance. Non-GAAP net income, diluted earnings per share and operating margin are key components of the financial metrics utilized by the company’s board of directors to measure, in part, management’s performance and determine significant elements of management’s compensation.

The company encourages investors to carefully consider its results under GAAP, as well as its supplemental non-GAAP information and the reconciliation between these presentations, to more fully understand its business. Reconciliations between GAAP and non-GAAP results are presented in the tables of this release.

Use of forward-looking statements
This release may contain forward-looking statements that involve risks and uncertainties. Among the important factors to which our business is subject that could cause actual results to differ materially from those in any forward-looking statements are: (i) changes in the rate of growth in the markets we serve; (ii) the volume, timing and mix of customer orders among our products and services; (iii) our ability to adjust our operating expenses to align with our revenue expectations; (iv) uncertainty regarding the impact of our recent inclusion by the China Ministry of Commerce announcement that Illumina is included on its “unreliable entities list” as well as tariffs recently imposed or threatened by the U.S. government and its trading partners, and other possible tariffs or trade protection measures; (v) our ability to manufacture robust instrumentation and consumables; (vi) the success of products and services competitive with our own; (vii) challenges inherent in developing, manufacturing, and launching new products and services, including expanding or modifying manufacturing operations and reliance on third-party suppliers for critical components; (viii) the impact of recently launched or pre-announced products and services on existing products and services; (ix) our ability to modify our business strategies to accomplish our desired operational goals; (x) our ability to realize the anticipated benefits from prior or future actions to streamline and improve our R&D processes, reduce our operating expenses and maximize our revenue growth; (xi) our ability to further develop and commercialize our instruments, consumables, and products; (xii) to deploy new products, services, and applications, and to expand the markets for our technology platforms; (xiii) the risk of additional litigation arising against us in connection with the GRAIL acquisition; (xiv) our ability to obtain approval by third-party payors to reimburse patients for our products; (xv) our ability to obtain regulatory clearance for our products from government agencies; (xvi) our ability to successfully partner with other companies and organizations to develop new products, expand markets, and grow our business; (xvii) uncertainty, or adverse economic and business conditions, including as a result of slowing or uncertain economic growth or armed conflict; (xviii) the application of generally accepted accounting principles, which are highly complex and involve many subjective assumptions, estimates, and judgments and (xix) legislative, regulatory and economic developments, together with other factors detailed in our filings with the Securities and Exchange Commission, including our most recent filings on Forms 10-K and 10-Q, or in information disclosed in public conference calls, the date and time of which are released beforehand.
4


We undertake no obligation, and do not intend, to update these forward-looking statements, to review or confirm analysts’ expectations, or to provide interim reports or updates on the progress of the current quarter.

About Illumina
Illumina is improving human health by unlocking the power of the genome. Our focus on innovation has established us as a global leader in DNA sequencing and array-based technologies, serving customers in the research, clinical, and applied markets. Our products are used for applications in the life sciences, oncology, reproductive health, agriculture, and other emerging segments. To learn more, visit www.illumina.com and connect with us on X, Facebook, LinkedIn, Instagram, TikTok, and YouTube.

# # #
5


Illumina, Inc.
Condensed Consolidated Balance Sheets
(In millions)

December 29,
2024
December 31,
2023
ASSETS (unaudited)
Current assets:
Cash and cash equivalents $ 1,127  $ 1,048 
Short-term investments 93 
Accounts receivable, net 735  734 
Inventory, net 547  587 
Prepaid expenses and other current assets 244  234 
Total current assets 2,746  2,609 
Property and equipment, net 815  1,007 
Operating lease right-of-use assets 419  544 
Goodwill 1,113  2,545 
Intangible assets, net 295  2,993 
Deferred tax assets, net 567  56 
Other assets 348  357 
Total assets $ 6,303  $ 10,111 
LIABILITIES AND STOCKHOLDERS’ EQUITY
Current liabilities:
Accounts payable $ 221  $ 245 
Accrued liabilities 827  1,325 
Term debt, current portion 499  — 
Total current liabilities 1,547  1,570 
Operating lease liabilities 554  687 
Term debt 1,490  1,489 
Other long-term liabilities 339  620 
Stockholders’ equity 2,373  5,745 
Total liabilities and stockholders’ equity $ 6,303  $ 10,111 

6


Illumina, Inc.
Condensed Consolidated Statements of Operations
(In millions, except per share amounts)
(unaudited)

Three Months Ended Year Ended
December 29,
2024
December 31,
2023
December 29,
2024
December 31,
2023
Revenue:
Product revenue $ 939  $ 923  $ 3,656  $ 3,787 
Service and other revenue 165  199  716  717 
Total revenue 1,104  1,122  4,372  4,504 
Cost of revenue:
Cost of product revenue (a) 278  293  1,017  1,177 
Cost of service and other revenue (a) 82  108  367  392 
Amortization of acquired intangible assets 16  47  127  191 
Total cost of revenue 376  448  1,511  1,760 
Gross profit 728  674  2,861  2,744 
Operating expense:
Research and development (a) 256  341  1,169  1,354 
Selling, general and administrative (a) 279  485  1,092  1,612 
Goodwill and intangible impairment —  1,889  827 
Legal contingency and settlement 18  (456) 20 
Total operating expense 553  838  3,694  3,813 
Income (loss) from operations 175  (164) (833) (1,069)
Other income (expense), net 13  (4) (346) (48)
Income (loss) before income taxes 188  (168) (1,179) (1,117)
Provision for income taxes 44  44 
Net income (loss) $ 187  $ (176) $ (1,223) $ (1,161)
Earnings (loss) per share:
Basic $ 1.17  $ (1.11) $ (7.69) $ (7.34)
Diluted $ 1.17  $ (1.11) $ (7.69) $ (7.34)
Shares used in computing earnings (loss) per share:
Basic 159  159  159  158 
Diluted 160  159  159  158 

(a) Includes stock-based compensation expense for stock-based awards:

Three Months Ended Year Ended
December 29,
2024
December 31,
2023
December 29,
2024
December 31,
2023
Cost of product revenue $ $ $ 25  $ 29 
Cost of service and other revenue
Research and development 31  39  146  155 
Selling, general and administrative 42  48  194  189 
Stock-based compensation expense before taxes
$ 80  $ 96  $ 371  $ 380 

7


Illumina, Inc.
Condensed Statements of Cash Flows
(In millions)
(unaudited)

TABLE 1: CONSOLIDATED STATEMENTS OF CASH FLOWS AND FREE CASH FLOWS:

Three Months Ended Year Ended
December 29,
2024
December 31,
2023
December 29,
2024
December 31,
2023
Net cash provided by operating activities $ 364  $ 224  $ 837  $ 478 
Net cash used in investing activities (48) (84) (178) (231)
Net cash used in financing activities (47) (27) (570) (1,210)
Effect of exchange rate changes on cash and cash equivalents (11) (10) — 
Net increase (decrease) in cash and cash equivalents 258  121  79  (963)
Cash and cash equivalents, beginning of period 869  927  1,048  2,011 
Cash and cash equivalents, end of period $ 1,127  $ 1,048  $ 1,127  $ 1,048 
Calculation of free cash flow:
Net cash provided by operating activities $ 364  $ 224  $ 837  $ 478 
Purchases of property and equipment (42) (51) (142) (195)
Free cash flow (a) $ 322  $ 173  $ 695  $ 283 

TABLE 2: CORE ILLUMINA FREE CASH FLOWS:
Three Months Ended Year Ended
December 29,
2024
December 29,
2024
Net cash provided by operating activities $ 364  $ 1,207 
Purchases of property and equipment (42) (137)
Free cash flow (a)
$ 322  $ 1,070 

(a)Free cash flow, which is a non-GAAP financial measure, is calculated as net cash provided by operating activities reduced by purchases of property and equipment. Free cash flow is useful to management as it is one of the metrics used to evaluate our performance and to compare us with other companies in our industry. However, our calculation of free cash flow may not be comparable to similar measures used by other companies.
8


Illumina, Inc.
Results of Operations - Constant Currency Revenue
(Dollars in millions)
(unaudited)

TABLE 1: CORE ILLUMINA - CONSTANT CURRENCY REVENUE:

Three Months Ended Year Ended
December 29,
2024
December 31,
2023
% Change December 29,
2024
December 31,
2023
% Change
Revenue
$ 1,104  $ 1,097  % $ 4,332  $ 4,438  (2) %
Less: Hedge gains 10  15  18 
Revenue, excluding hedge effect
1,099  1,087  4,317  4,420 
Less: Exchange rate effect —  —  (8) — 
Constant currency revenue (a)
$ 1,099  $ 1,087  % $ 4,325  $ 4,420  (2) %

TABLE 2: CONSOLIDATED - CONSTANT CURRENCY REVENUE:

Three Months Ended Year Ended
December 29,
2024
December 31,
2023
% Change December 29,
2024
December 31,
2023
% Change
Revenue
$ 1,104  $ 1,122  (2) % $ 4,372  $ 4,504  (3) %
Less: Hedge gains 10  15  18 
Revenue, excluding hedge effect
1,099  1,112  4,357  4,486 
Less: Exchange rate effect —  —  (8) — 
Constant currency revenue (a)
$ 1,099  $ 1,112  (1) % $ 4,365  $ 4,486  (3) %

(a)Constant currency revenue growth, which is a non-GAAP financial measure, is calculated using comparative prior period foreign exchange rates to translate current period revenue, net of the effects of hedges.



9


Illumina, Inc.
Results of Operations - Non-GAAP
(In millions, except per share amounts)
(unaudited)


TABLE 1: CORE ILLUMINA - RECONCILIATION OF GAAP AND NON-GAAP DILUTED EARNINGS PER SHARE:

Three Months Ended Year Ended
December 29,
2024
December 29,
2024
December 31,
2023
GAAP earnings per share - diluted $ 0.73  $ 5.61  $ 1.70 
Cost of revenue (b) 0.10  0.40  0.39 
R&D expense (b) 0.01  0.04  0.18 
SG&A expense (b) 0.04  (1.06) 1.36 
Goodwill and intangible impairment (b) —  0.02  0.04 
Legal contingency and settlement (b) 0.11  (2.87) 0.13 
Other (income) expense, net (b) (0.19) 1.86  0.23 
GILTI, US foreign tax credits, and global minimum top-up tax (c) (0.03) 0.52  0.28 
Incremental non-GAAP tax expense (d) 0.10  (0.46) (0.54)
Income tax provision (e) 0.08  0.10  0.23 
Non-GAAP earnings per share - diluted (a) $ 0.95  $ 4.16  $ 4.00 

TABLE 2: CORE ILLUMINA - RECONCILIATION OF GAAP AND NON-GAAP NET INCOME:

Three Months Ended Year Ended
December 29,
2024
December 29,
2024
December 31,
2023
GAAP net income $ 117  $ 894  $ 269 
Cost of revenue (b) 17  64  62 
R&D expense (b) 29 
SG&A expense (b) (168) 216 
Goodwill and intangible impairment (b) — 
Legal contingency and settlement (b) 18  (456) 20 
Other (income) expense, net (b) (31) 295  36 
GILTI, US foreign tax credits, and global minimum top-up tax (c) (5) 82  45 
Incremental non-GAAP tax expense (d) 15  (73) (86)
Income tax provision (e) 13  16  37 
Non-GAAP net income (a) $ 152  $ 663  $ 634 

10


Illumina, Inc.
Results of Operations - Non-GAAP (continued)
(In millions, except per share amounts)
(unaudited)

TABLE 3: CONSOLIDATED - RECONCILIATION OF GAAP AND NON-GAAP DILUTED EARNINGS (LOSS) PER SHARE:

Three Months Ended Year Ended
December 29,
2024
December 31,
2023
December 29,
2024
December 31,
2023
GAAP earnings (loss) per share - diluted $ 1.17  $ (1.11) $ (7.69) $ (7.34)
Cost of revenue (b) 0.10  0.30  0.81  1.24 
R&D expense (b) 0.01  0.08  0.04  0.18 
SG&A expense (b) 0.04  0.90  (0.97) 1.54 
Goodwill and intangible impairment (b) —  0.04  11.88  5.23 
Legal contingency and settlement (b) 0.11  0.03  (2.87) 0.13 
Other (income) expense, net (b) (0.19) 0.01  1.85  0.23 
GILTI, US foreign tax credits, and global minimum top-up tax (c) (0.32) (0.01) 0.57  0.38 
Incremental non-GAAP tax expense (d) (0.14) (0.28) (1.26) (0.96)
Income tax provision (e) 0.08  0.18  0.09  0.23 
Non-GAAP earnings per share - diluted (a) $ 0.86  $ 0.14  $ 2.45  $ 0.86 

TABLE 4: CONSOLIDATED - RECONCILIATION OF GAAP AND NON-GAAP NET INCOME (LOSS):

Three Months Ended Year Ended
December 29,
2024
December 31,
2023
December 29,
2024
December 31,
2023
GAAP net income (loss) $ 187  $ (176) $ (1,223) $ (1,161)
Cost of revenue (b) 17  48  129  196 
R&D expense (b) 12  29 
SG&A expense (b) 143  (155) 244 
Goodwill and intangible impairment (b) —  1,889  827 
Legal contingency and settlement (b) 18  (456) 20 
Other (income) expense, net (b) (31) 295  36 
GILTI, US foreign tax credits, and global minimum top-up tax (c) (51) (2) 90  61 
Incremental non-GAAP tax expense (d) (23) (44) (201) (152)
Income tax provision (e) 13  28  16  37 
Non-GAAP net income (a) $ 138  $ 22  $ 390  $ 137 

Amounts in tables are rounded to the nearest millions. As a result, certain amounts may not recalculate.

(a)Non-GAAP net income and diluted earnings per share exclude the effects of the pro forma adjustments detailed above. Non-GAAP net income and diluted earnings per share are key components of the financial metrics utilized by the company’s board of directors to measure, in part, management’s performance and determine significant elements of management’s compensation. Management has excluded the effects of these items in these measures to assist investors in analyzing and assessing our past and future operating performance.
(b)Refer to Reconciliations between GAAP and Non-GAAP Results of Operations for details of amounts.
(c)Amounts represent the impact of GRAIL pre-acquisition net operating losses on GILTI, the utilization of US foreign tax credits, and the Pillar Two global minimum top-up tax, which became effective in Q1 2024.
(d)Incremental non-GAAP tax expense reflects the tax impact of the non-GAAP adjustments listed.
(e)Amounts represent the difference between book and tax accounting related to stock-based compensation cost.
11


Illumina, Inc.
Results of Operations - Non-GAAP (continued)
(Dollars in millions)
(unaudited)

TABLE 5: RECONCILIATION OF GAAP AND NON-GAAP RESULTS OF OPERATIONS AS A PERCENT OF REVENUE:

Three Months Ended
December 29, 2024 December 31, 2023
Core/Consolidated Core Illumina GRAIL Elims Consolidated
GAAP gross profit (loss) (b) $ 728  65.9  % $ 695  63.3  % $ (19) $ (2) $ 674  60.1  %
Amortization of acquired intangible assets 17  1.5  % 14  1.3  % 33  —  47  4.2  %
Restructuring (g) —  —  0.1  % —  —  0.1  %
Non-GAAP gross profit (a) $ 745  67.4  % $ 710  64.7  % $ 14  $ (2) $ 722  64.4  %
GAAP R&D expense $ 256  23.2  % $ 260  23.7  % $ 84  $ (3) $ 341  30.4  %
Acquisition-related expenses (d) (1) (0.1) % (1) (0.1) % —  —  (1) (0.1) %
Restructuring (g) —  —  (11) (1.0) % —  —  (11) (1.0) %
Non-GAAP R&D expense $ 255  23.1  % $ 248  22.6  % $ 84  $ (3) $ 329  29.3  %
GAAP SG&A expense $ 279  25.2  % $ 391  35.6  % $ 94  $ —  $ 485  43.2  %
Amortization of acquired intangible assets —  —  —  —  (1) —  (1) (0.1) %
Contingent consideration liabilities (c) 11  1.0  % (58) (5.2) % —  —  (58) (5.1) %
Acquisition-related expenses (d) (4) (0.3) % (26) (2.4) % (9) —  (35) (3.1) %
Restructuring (g) (15) (1.3) % (48) (4.4) % (1) —  (49) (4.4) %
Non-GAAP SG&A expense $ 271  24.6  % $ 259  23.6  % $ 83  $ —  $ 342  30.5  %
GAAP goodwill and intangible impairment $ —  —  $ 0.5  % $ —  $ —  $ 0.5  %
Intangible (IPR&D) impairment (i) —  —  (6) (0.5) % —  —  (6) (0.5) %
Non-GAAP goodwill and intangible impairment $ —  —  $ —  —  $ —  $ —  $ —  — 
GAAP legal contingency and settlement $ 18  1.7  % $ 0.5  % $ —  $ —  $ 0.5  %
Legal contingency and settlement (h) (18) (1.7) % (6) (0.5) % —  —  (6) (0.5) %
Non-GAAP legal contingency and settlement $ —  —  $ —  —  $ —  $ —  $ —  — 
GAAP operating profit (loss) $ 175  15.8  % $ 33  3.0  % $ (197) $ —  $ (164) (14.6) %
Cost of revenue 17  1.5  % 15  1.4  % 33  —  48  4.3  %
R&D costs 0.1  % 12  1.1  % —  —  12  1.1  %
SG&A costs 0.6  % 131  12.0  % 12  —  143  12.8  %
Goodwill and intangible impairment —  —  0.5  % —  —  0.5  %
Legal contingency and settlement 18  1.7  % 0.5  % —  —  0.5  %
Non-GAAP operating profit (loss) (a) $ 218  19.7  % $ 203  18.5  % $ (152) $ —  $ 51  4.6  %
GAAP other income (expense), net $ 13  1.2  % $ (6) (0.5) % $ $ —  $ (4) (0.4) %
Strategic investment related gain, net (e) (31) (2.9) % —  —  —  —  —  — 
Gain on Helix contingent value right (f) —  —  (2) (0.2) % —  —  (2) (0.2) %
Acquisition-related expenses (d) —  —  0.3  % —  —  0.3  %
Non-GAAP other (expense) income, net (a) $ (18) (1.7) % $ (5) (0.4) % $ $ —  $ (3) (0.3) %
12


Illumina, Inc.
Results of Operations - Non-GAAP (continued)
(Dollars in millions)
(unaudited)

TABLE 5: RECONCILIATION OF GAAP AND NON-GAAP RESULTS OF OPERATIONS AS A PERCENT OF REVENUE:

Year Ended
December 29, 2024
Core Illumina GRAIL Elims Consolidated
GAAP gross profit (loss) (b) $ 2,909  67.1  % $ (38) $ (10) $ 2,861  65.4  %
Amortization of acquired intangible assets 63  1.5  % 65  —  128  3.0  %
Restructuring (g) —  —  —  — 
Non-GAAP gross profit (a) $ 2,973  68.6  % $ 27  $ (10) $ 2,990  68.4  %
GAAP R&D expense $ 988  22.8  % $ 189  $ (8) $ 1,169  26.7  %
Acquisition-related expenses (d) (4) (0.1) % —  —  (4) (0.1) %
Restructuring (g) (2) —  —  —  (2) — 
Non-GAAP R&D expense $ 982  22.7  % $ 189  $ (8) $ 1,163  26.6  %
GAAP SG&A expense $ 900  20.7  % $ 192  $ —  $ 1,092  25.0  %
Amortization of acquired intangible assets (1) —  (2) —  (3) (0.1) %
Contingent consideration liabilities (c) 315  7.2  % —  —  315  7.2  %
Acquisition-related expenses (d) (87) (2.0) % (11) —  (98) (2.3) %
Restructuring (g) (58) (1.3) % (1) —  (59) (1.3) %
Non-GAAP SG&A expense $ 1,069  24.6  % $ 178  $ —  $ 1,247  28.5  %
GAAP goodwill and intangible impairment $ 0.1  % $ 1,886  $ —  $ 1,889  43.2  %
Goodwill impairment (i) —  —  (1,466) —  (1,466) (33.5) %
Intangible (IPR&D) impairment (i) (3) (0.1) % (420) —  (423) (9.7) %
Non-GAAP goodwill and intangible impairment $ —  —  $ —  $ —  $ —  — 
GAAP legal contingency and settlement $ (456) (10.5) % $ —  $ —  $ (456) (10.4) %
Legal contingency and settlement (h) 456  10.5  % —  —  456  10.4  %
Non-GAAP legal contingency and settlement $ —  —  $ —  $ —  $ —  — 
GAAP operating profit (loss) $ 1,473  34.0  % $ (2,305) $ (1) $ (833) (19.1) %
Cost of revenue 64  1.5  % 65  —  129  3.0  %
R&D costs 0.1  % —  —  0.1  %
SG&A costs (168) (3.9) % 13  —  (155) (3.5) %
Goodwill and intangible impairment 0.1  % 1,886  —  1,889  43.2  %
Legal contingency and settlement (456) (10.5) % —  —  (456) (10.4) %
Non-GAAP operating profit (loss) (a) $ 922  21.3  % $ (341) $ (1) $ 580  13.3  %
GAAP other (expense) income, net $ (350) (8.1) % $ $ (1) $ (346) (7.9) %
Strategic investment related loss, net (e) 308  7.1  % —  —  308  7.1  %
Gain on Helix contingent value right (f) (15) (0.3) % —  —  (15) (0.3) %
Acquisition-related expenses (d) —  —  —  — 
Non-GAAP other (expense) income, net (a) $ (55) (1.3) % $ $ (1) $ (51) (1.1) %
13


Illumina, Inc.
Results of Operations - Non-GAAP (continued)
(Dollars in millions)
(unaudited)

TABLE 5: RECONCILIATION OF GAAP AND NON-GAAP RESULTS OF OPERATIONS AS A PERCENT OF REVENUE:

Year Ended
December 31, 2023
Core Illumina GRAIL Elims Consolidated
GAAP gross profit (loss) (b) $ 2,856  64.4  % $ (96) $ (16) $ 2,744  60.9  %
Amortization of acquired intangible assets 57  1.3  % 134  —  191  4.3  %
Restructuring (g) 0.1  % —  —  0.1  %
Non-GAAP gross profit (a) $ 2,918  65.8  % $ 38  $ (16) $ 2,940  65.3  %
GAAP R&D expense $ 1,030  23.2  % $ 338  $ (14) $ 1,354  30.1  %
Acquisition-related expenses (d) (2) —  —  —  (2) — 
Restructuring (g) (27) (0.6) % —  —  (27) (0.7) %
Non-GAAP R&D expense $ 1,001  22.6  % $ 338  $ (14) $ 1,325  29.4  %
GAAP SG&A expense $ 1,248  28.1  % $ 366  $ (2) $ 1,612  35.8  %
Amortization of acquired intangible assets (1) —  (4) —  (5) (0.1) %
Contingent consideration liabilities (c) 24  0.5  % —  —  24  0.5  %
Acquisition-related expenses (d) (88) (1.9) % (21) —  (109) (2.4) %
Restructuring (g) (119) (2.7) % (4) —  (123) (2.7) %
Proxy contest (32) (0.7) % —  —  (32) (0.7) %
Non-GAAP SG&A expense $ 1,032  23.3  % $ 337  $ (2) $ 1,367  30.4  %
GAAP goodwill and intangible impairment $ 0.1  % $ 821  $ —  $ 827  18.3  %
Goodwill impairment (i) —  —  (712) —  (712) (15.7) %
Intangible (IPR&D) impairment (i) (6) (0.1) % (109) —  (115) (2.6) %
Non-GAAP goodwill and intangible impairment $ —  —  $ —  $ —  $ —  — 
GAAP legal contingency and settlement $ 20  0.4  % $ —  $ —  $ 20  0.4  %
Legal contingency and settlement (h) (20) (0.4) % —  —  (20) (0.4) %
Non-GAAP legal contingency and settlement $ —  —  $ —  $ —  $ —  — 
GAAP operating profit (loss) $ 552  12.4  % $ (1,621) $ —  $ (1,069) (23.7) %
Cost of revenue 62  1.5  % 134  —  196  4.4  %
R&D costs 29  0.6  % —  —  29  0.7  %
SG&A costs 216  4.9  % 28  —  244  5.4  %
Goodwill and intangible impairment 0.1  % 821  —  827  18.3  %
Legal contingency and settlement 20  0.4  % —  —  20  0.4  %
Non-GAAP operating profit (loss) (a) $ 885  19.9  % $ (638) $ —  $ 247  5.5  %
GAAP other (expense) income, net $ (58) (1.3) % $ 10  $ —  $ (48) (1.1) %
Strategic investment related loss, net (e) 35  0.8  % —  —  35  0.8  %
Gain on Helix contingent value right (f) (10) (0.2) % —  —  (10) (0.2) %
Acquisition-related expenses (d) 11  0.2  % —  —  11  0.2  %
Non-GAAP other (expense) income, net (a) $ (22) (0.5) % $ 10  $ —  $ (12) (0.3) %

14


Amounts in tables are rounded to the nearest millions. As a result, certain amounts may not recalculate.
Percentages of revenue are calculated based on the revenue of the respective segment.

(a)Non-GAAP gross profit, included within non-GAAP operating profit (loss), is a key measure of the effectiveness and efficiency of manufacturing processes, product mix and the average selling prices of our products and services. Non-GAAP operating profit (loss) and non-GAAP other income (expense), net exclude the effects of the pro forma adjustments as detailed above. Non-GAAP operating margin is a key component of the financial metrics utilized by the company’s board of directors to measure, in part, management’s performance and determine significant elements of management’s compensation. Management has excluded the effects of these items in these measures to assist investors in analyzing and assessing past and future operating performance.
(b)Reconciling amounts are recorded in cost of revenue.
(c)Amounts consist primarily of fair value adjustments for our contingent consideration liability related to GRAIL.
(d)Amounts consist primarily of legal and other expenses related to the acquisition and divestiture of GRAIL. Amounts in other income (expense), net relate to unrealized gains/losses for foreign currency balance sheet remeasurement of the EC fine liability, which was reversed in Q3 2024, and mark-to-market gains/losses on hedge for the EC fine.
(e)Amounts consist primarily of mark-to-market adjustments and impairments from strategic investments. Amount for FY 2024 primarily relates to impairment recorded on our retained investment in GRAIL post spin-off.
(f)Amounts consist of fair value adjustments related to our Helix contingent value right, which was settled in Q3 2024.
(g)Amounts consist primarily of lease and other asset impairments and employees severance costs.
(h)Amount for FY 2024 primarily consists of the reversal of the accrued EC fine, including accrued interest. Amount for FY 2023 primarily consists of an adjustment recorded to our accrual for the EC fine.
(i)Amounts for FY 2024 and FY 2023 consist of goodwill and IPR&D intangible asset impairments related to GRAIL and IPR&D intangible asset impairments related to Core Illumina.

15


Illumina, Inc.
Results of Operations - Non-GAAP (continued)
(Dollars in millions)
(unaudited)

TABLE 6: CORE ILLUMINA - RECONCILIATION OF GAAP AND NON-GAAP TAX PROVISION:

Three Months Ended Year Ended
December 29,
2024
December 29,
2024
GAAP tax provision $ 70  37.9  % $ 229  20.4  %
Incremental non-GAAP tax expense (b) (15) 73 
Income tax provision (c) (13) (16)
GILTI, US foreign tax credits, and global minimum top-up tax (d) (82)
Non-GAAP tax provision (a) $ 47  23.7  % $ 204  23.6  %

Year Ended
December 31,
2023
GAAP tax provision $ 224  45.4  %
Incremental non-GAAP tax expense (b) 86 
Income tax provision (c) (37)
GILTI and US foreign tax credits (d)
(45)
Non-GAAP tax provision (a) $ 228  26.5  %

TABLE 7: CONSOLIDATED - RECONCILIATION OF GAAP AND NON-GAAP TAX PROVISION:

Three Months Ended Year Ended
December 29,
2024
December 29,
2024
GAAP tax provision $ 0.6  % $ 44  (3.8) %
Incremental non-GAAP tax expense (b) 23  201 
Income tax provision (c) (13) (16)
GILTI, US foreign tax credits, and global minimum top-up tax (d) 51  (90)
Non-GAAP tax provision (a) $ 62  31.1  % $ 139  26.3  %

Three Months Ended Year Ended
December 31,
2023
December 31,
2023
GAAP tax provision $ (4.9) % $ 44  (3.9) %
Incremental non-GAAP tax expense (b) 44  152 
Income tax provision (c) (28) (37)
GILTI and US foreign tax credits (d) (61)
Non-GAAP tax provision (a) $ 26  55.4  % $ 98  41.8  %

(a)Non-GAAP tax provision excludes the effects of the pro forma adjustments detailed above, which have been excluded to assist investors in analyzing and assessing past and future operating performance.
(b)Incremental non-GAAP tax expense reflects tax impact of the non-GAAP adjustments listed in Table 2 and 4.
(c)Amounts represent the difference between book and tax accounting related to stock-based compensation cost.
(d)Amounts represent the impact of GRAIL pre-acquisition net operating losses on GILTI, the utilization of US foreign tax credits, and the Pillar Two global minimum top-up tax, which became effective in Q1 2024.
16